Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846996.1_cds_XP_016509856.1_22755
CDS Infomation

[gene=LOC107827275] [db_xref=GeneID:107827275] [protein=tRNA-specific 2-thiouridylase MnmA-like] [protein_id=XP_016509856.1] [location=join(1315..1674,2402..2476,2997..3050,3250..3328,3412..3539,4455..4538,4726..4809,5419..5570,5908..6058,6383..6682)] [gbkey=CDS]
Sequence

ATGCTAAGGGCAACCATGTCAACAATACCTCTTACCCTTCAATCTTCACAATCTCTCAAA
CACTTATTCTCCCTTTCCCATTTCCAAAAACCCCTTATCCACTCTTTTAATCAACCAAAA
AAGCTCACAACTTTTACAAGAAGACTGTTTTCTATAAAACCCATTTCAGTTTCATCCCCA
ATTAGGACTTATGTGGATGAGAAAATCGACCCCACATACTTATCTTGCTCCATGTCACAT
AAAAATCCTCTCAAAGTTGCGGTTTTGGTTAGTGGCGGCGTTGATAGCAGCGTCGCTCTT
AGACTGCTTCATGCTGCTGGACATTCCTGTACTGCTTTTTATCTCAAGATTTGGTTTCAA
GAAGACTTTGAGAACTTTTGGTCTGAATGCCCATGGGAGGATGACTTAAAATATGCAAAG
GCTGTTTGTGACCAGGTTGATGTACCATTGGAAGTTGTCCATTTGACTGATGAATATTGG
AATAATGTGGTATCATATATCATTGAGGAGTACAAATGTGGCAGGACTCCAAATCCAGAT
GTCCTTTGTAATACTAGAATAAAATTTGGTGCTTTTATGGATGCCATTAGCGGAATGGAA
TTTGACTTTGTTGCTTCTGGACATTATGCAAAGATTGTCCACGCATCTACTGATCATCTG
GATGAACCTTCTATCTTAGAATTGTCAAAGGATATGGTCAAGGACCAAACCTACTTCCTT
TCGCATCTCTCACAGGCTCAGCTTAAACGGCTGATTTTCCCACTTGGATGTATCCCAAAG
GATGAAGTTCGCATGCTTGCTAAATCATTTAATCTACCAAACCAAGACAGGAAGGATTCA
CAAGGAATATGCTTTCTTGGCAAGATAAAATTCAGTGAATTTGTCGCTAGACACATTGGA
GAATCAGAAGGTGTTATATTGGAAGCAGAGAGTGGAGATTATCTCGGAAACCACCGTGGC
TTTTGGTTCTATACTATTGGCCAACGCCAAGGTTTACGTCTTCCTGGAGGACCCTGGTAT
GTTGTGGAGAAGGATATTAAAAACAATGTCGTATATGTATCGAGAAATTATTTCTCTGTT
GACAAGAAAAGACGGTTATTTCGTGTTGGATCCTTAAAATGGCTCAGTGGGTTACCTCCT
AGACAAATCAGTCAGCTTCAATGCAAGGTTCGTCATGGTCCCGGTTTTTACAACTGCAGC
TTGGCCATGGAAGTTGATGAACATGGGCAGGAAGTTGCAGTTGTCCGGATATCTGAAGAT
GATCAGGGTCTGGCAGCTGGACAATTTGCAGCCTTTTACAATGGAAGGACTTGTATTGGT
TCTGGCGTAATACTGGAGTCATGGGATGATCAAGGATATCCAATTTGTGAGAGGGCTCTT
GAAATTGCTCGAATGGAAGATAAATCCAAGCTTGGGAAACCAGTCAAGATAATGGTAAAA
CCAGAGCAGAGTTTTGCTACAATCTGA

Peptide Sequence

PEP ID

XP_016509856.1
PEP Infomation

PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Nicotiana tabacum]
Sequence

MLRATMSTIPLTLQSSQSLKHLFSLSHFQKPLIHSFNQPKKLTTFTRRLFSIKPISVSSP
IRTYVDEKIDPTYLSCSMSHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQ
EDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPD
VLCNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTDHLDEPSILELSKDMVKDQTYFL
SHLSQAQLKRLIFPLGCIPKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIG
ESEGVILEAESGDYLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVYVSRNYFSV
DKKRRLFRVGSLKWLSGLPPRQISQLQCKVRHGPGFYNCSLAMEVDEHGQEVAVVRISED
DQGLAAGQFAAFYNGRTCIGSGVILESWDDQGYPICERALEIARMEDKSKLGKPVKIMVK
PEQSFATI

Transcript Sequence

Gene sequence data has not been registered.